PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.8T85I
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 329aa    MW: 37237.8 Da    PI: 4.6513
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.8T85IgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08202246655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++ r RR+ri ++ +eL +l+P       +K++ ae+L  A +Y+k+Lq
  Araip.8T85I 202 SIAARERRRRITEKTQELGKLVPGG-----PKMNTAEMLHAASRYVKYLQ 246
                  677899*****************95.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.28E-12194257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.322196245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-11199261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-6202246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-9202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MALSTYLNGD ALQNSLMSDN FTTNFHELTA PEELTLDHYY HQHNQEGSFP NNFFFDPYFD  60
LNNEFFHTEI LSSHQLLGPD CTSSHNSFIS PNDLFQTEYS NVNTLLSCPK RQKYFHEDEE  120
LQLSPPLKEY ASPSLFDGFI LNSSSLLPSE EAALAEELLL PAAVAAPSSD FMVPEVVRNG  180
FCVGINNESE KKDNERTISA QSIAARERRR RITEKTQELG KLVPGGPKMN TAEMLHAASR  240
YVKYLQTQVG MLQLMNTLQK ENEVAPPSED LCALVTSPFV QEKLYSEELC FVPKDFVTTL  300
TNQHDVRSKP TILKDLKELI ETNNLQKKA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016168685.10.0PREDICTED: transcription factor bHLH52-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.19e-22bHLH family protein